Information for 1-VATCCCAGCW (Motif 1)


Reverse Opposite:

p-value:1e-29
log p-value:-6.710e+01
Information Content per bp:1.514
Number of Target Sequences with motif360.0
Percentage of Target Sequences with motif22.10%
Number of Background Sequences with motif135.7
Percentage of Background Sequences with motif8.19%
Average Position of motif in Targets37.1 +/- 20.6bp
Average Position of motif in Background41.3 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Su(H)/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:VATCCCAGCW
-CTCCCAC--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-VATCCCAGCW
HTTTCCCASG-

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----VATCCCAGCW--
NNNTCCATCCCATAANN

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:VATCCCAGCW-
-TGCCCAGNHW

Ik-1

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---VATCCCAGCW
GGTATTCCCAANN

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---VATCCCAGCW--
AGTATTCTCGGTTGC

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---VATCCCAGCW--
ACCACTCTCGGTCAC

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-VATCCCAGCW----
ATTTCCCAGVAKSCY

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-VATCCCAGCW
AAATCACAGCA

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:VATCCCAGCW
GTTCCCACG-