Information for 5-AAARTGMTAGGA (Motif 10)


Reverse Opposite:

p-value:1e-13
log p-value:-3.195e+01
Information Content per bp:1.708
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets38.4 +/- 17.9bp
Average Position of motif in Background42.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

tll/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAARTGMTAGGA
AAAGTCAAA---

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAARTGMTAGGA
GAAAAAATTGCAAGG-

CST6(MacIsaac)/Yeast

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAARTGMTAGGA
NAAATGCA----

blmp-1/MA0537.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAARTGMTAGGA
AAAAGTGAAAA--

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAARTGMTAGGA
GAAAGTGAAAGT-

CDF3/MA0974.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAARTGMTAGGA
AAAAAGTGC-----

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AAARTGMTAGGA---
AAANNGAAAGTGAAAGTAAAN

Optix/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAARTGMTAGGA
-ANGTGATA---

Blimp-1/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAARTGMTAGGA
AANGAAAGTGAAAGT-

byn/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAARTGMTAGGA
-AAGTGCGA---