Information for 10-CAAAGATG (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.798
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif7.18%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets35.7 +/- 19.1bp
Average Position of motif in Background39.0 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

pan/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGATG
ATCAAAG---

SEP3/MA0563.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGATG--
CCAAAAATGGA

SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAAAGATG-
CCAAAAAGGG

MNB1A/MA0053.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAAAGATG
-AAAGC--

DOF5.7/MA0984.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAAAGATG
AAAAGAGG

Dof2/MA0020.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAAGATG
-AAAGCA-

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGATG
GGAACAAAGR--

pan/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAAAGATG
GATCAAAG---

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAAGATG-----
-CAAGATGGCGGC

pan/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAAAGATG
TATCAAA----