Information for 16-ATATACCCAA (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.885
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets39.8 +/- 14.0bp
Average Position of motif in Background11.1 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MOT2/MA0379.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATATACCCAA
ATATA-----

TaMYB80(MYB)/Triticum aestivum/AthaMap

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ATATACCCAA
NGGATATTCCC--

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATATACCCAA
TTATACNC--

Unknown4/Drosophila-Promoters/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATATACCCAA
AAAAATACCRMA

Cf2/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATATACCCAA
TATATATAC----

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ATATACCCAA--
ATGGGATATATCCGCCT

Cf2/MA0015.1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATATACCCAA
NTATATATAC----

MYB59/MA1042.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ATATACCCAA-
---TACCTAAC

TATA-box/SacCer-Promoters/Homer

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATATACCCAA
BBHWTATATA-----

Ik-1

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATATACCCAA--
GGTATTCCCAANN