Information for 12-CGGCGGCT (Motif 19)


Reverse Opposite:

p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.784
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets36.1 +/- 19.8bp
Average Position of motif in Background31.2 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME6(MacIsaac)/Yeast

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCT-
TCGGCGGCTA

ERF094/MA1049.1/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCT
CGGCGGCG

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:3
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCT-
TCGGCGGCTA

ERF1B/MA0567.1/Jaspar

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCT
TGGCGGCG

ERF096/MA0998.1/Jaspar

Match Rank:5
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGGCT-
NNGGCGGCGN

UME6/MA0412.1/Jaspar

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCT----
TCGGCGGCTAATT

ERF098/MA0999.1/Jaspar

Match Rank:7
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCT-
-GGCGGCNN

ERF13/MA1004.1/Jaspar

Match Rank:8
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CGGCGGCT
TGGCGGCG

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:9
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCT
-GGCGGCG

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CGGCGGCT-
-GGCGGCGG