Information for 2-GGAGGCYGAG (Motif 2)


Reverse Opposite:

p-value:1e-24
log p-value:-5.737e+01
Information Content per bp:1.883
Number of Target Sequences with motif190.0
Percentage of Target Sequences with motif11.66%
Number of Background Sequences with motif43.7
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets36.6 +/- 18.9bp
Average Position of motif in Background38.1 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGAGGCYGAG-
-GAGSCCGAGC

CRZ1(MacIsaac)/Yeast

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGAGGCYGAG
-GAGGCTG--

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGAGGCYGAG-----
-CAGGCCNNGGCCNN

CRZ1/MA0285.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGAGGCYGAG
-GTGGCTNNG

ADR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCYGAG
NGGAGG-----

ADR1(MacIsaac)/Yeast

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCYGAG
NGGAGG-----

GCR2(MacIsaac)/Yeast

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCYGAG
NGGAAGC----

GCR2/MA0305.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCYGAG
NGGAAGC----

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGGCYGAG
--AGGCCTAG

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGGCYGAG
GGTGGCAAA-