Information for 19-ATGCAGTATT (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.662
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets33.9 +/- 19.5bp
Average Position of motif in Background37.1 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGTATT---
CCTTGCAATTTTTNN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATGCAGTATT---
NNNANTGCAGTGCNNTT

SOX8/MA0868.1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ATGCAGTATT
AACAATGTGCAGTGTT

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGCAGTATT--
ATGCATAATTCA

PHD1/MA0355.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGTATT
ACCTGCAGCA--

SOK2/MA0385.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGTATT
ACCTGCAGGCA-

ABI3/MA0564.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGCAGTATT
TGCATGCAG----

Unknown4/Drosophila-Promoters/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGCAGTATT---
-TKYGGTATTTTT

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATGCAGTATT
GAACAATTGCAGTGTT

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGTATT---
TCATGAATWATTCAT