Information for 20-TCTTCATCCA (Motif 22)


Reverse Opposite:

p-value:1e-5
log p-value:-1.168e+01
Information Content per bp:1.843
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.1 +/- 17.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bcd/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCTTCATCCA
GGTTAATCCN

Ptx1/MA0201.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCTTCATCCA
--TTAATCC-

bcd-2/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCTTCATCCA
--TTAATCC-

Oc/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCTTCATCCA
NNTTAATCCN

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTTCATCCA----
NNCATTCATTCATNNN

oc/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCTTCATCCA
--TTAATCC-

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCTTCATCCA
--TTAATCCC

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTTCATCCA
CKTCKTCTTY--

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCTTCATCCA
--ATAATCCC

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCTTCATCCA
GCTTCC----