Information for 22-CCGCCAGGCC (Motif 23)


Reverse Opposite:

p-value:1e-4
log p-value:-9.910e+00
Information Content per bp:1.694
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets38.8 +/- 21.1bp
Average Position of motif in Background46.5 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CCGCCAGGCC-
---CTAGGCCT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCGCCAGGCC-
---CNAGGCCT

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CCGCCAGGCC--------
----CAGGCCNNGGCCNN

SKN7(MacIsaac)/Yeast

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCGCCAGGCC
--TCCGGGCC

SKN7/MA0381.1/Jaspar

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CCGCCAGGCC--
------GGCCAT

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCGCCAGGCC
ATGCCAGACN

grh/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCGCCAGGCC
--AGCAGGTA

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGCCAGGCC
TGCCCCCGGGCA

SKN7/SKN7_H2O2Lo/[](Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGCCAGGCC-
--GCCNGGGCC

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGCCAGGCC
--CACAGN--