Information for 23-GCCTTCCTTC (Motif 24)


Reverse Opposite:

p-value:1e-4
log p-value:-9.596e+00
Information Content per bp:1.451
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets38.9 +/- 21.7bp
Average Position of motif in Background37.5 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2/MA0305.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCCTTCCTTC
-GCTTCCT--

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCCTTCCTTC
-ACTTCCTG-

GCR2(MacIsaac)/Yeast

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCCTTCCTTC
-GCTTCCN--

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCCTTCCTTC-
-ACTTCCTGBT

GCR1(MacIsaac)/Yeast

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCTTCCTTC
GGGCTTCCA--

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:6
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GCCTTCCTTC-
CCTTCCTTCCTTCCTTCC

GCR1/MA0304.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCTTCCTTC
GGCTTCCA--

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCTTCCTTC-
NNAYTTCCTGHN

Eip74EF/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCTTCCTTC
ATACTTCCT--

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCTTCCTTC
CACTTCCTGT