Information for 9-KTRTMTGTGTVT (Motif 25)


Reverse Opposite:

p-value:1e-3
log p-value:-7.895e+00
Information Content per bp:1.685
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets34.2 +/- 17.3bp
Average Position of motif in Background30.8 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

sd/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:KTRTMTGTGTVT
-AANATGTNT--

SeqBias: CA-repeat

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:KTRTMTGTGTVT
-TGTGTGTGTG-

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.72
Offset:4
Orientation:forward strand
Alignment:KTRTMTGTGTVT
----KTGTTTGC

Cf2/MA0015.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:KTRTMTGTGTVT
GTATATATAC--

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:KTRTMTGTGTVT
-----TGTTTAC

Cf2/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:KTRTMTGTGTVT
GTATATATA---

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-KTRTMTGTGTVT---
NNNNTTTGTTTACNNT

Top2/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:KTRTMTGTGTVT---
-TACATATGTATGTA

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:forward strand
Alignment:KTRTMTGTGTVT--
-----TGTTTATTT

twi/dmmpmm(Down)/fly

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KTRTMTGTGTVT
--ACATATGTT-