Information for 1-CTCCTSCCTGYA (Motif 3)


Reverse Opposite:

p-value:1e-24
log p-value:-5.607e+01
Information Content per bp:1.613
Number of Target Sequences with motif168.0
Percentage of Target Sequences with motif10.31%
Number of Background Sequences with motif33.5
Percentage of Background Sequences with motif2.02%
Average Position of motif in Targets38.1 +/- 18.5bp
Average Position of motif in Background40.2 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:1
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
----TNCCTGCA

Tag/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
---CTACCTG--

Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTCCTSCCTGYA
-KBCTACCTGW-

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CTCCTSCCTGYA
------GCTGTG

SOK2(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
---TTGCCTGC-

MOT3/MA0340.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
----TACCTN--

MOT3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
----TACCTN--

MOT3(MacIsaac)/Yeast

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
----TACCTN--

SOK2/MA0385.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCCTSCCTGYA---
----NNCCTGCAGGT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCCTSCCTGYA
-CACTTCCTGT-