Information for 4-ATTTATTT (Motif 6)


Reverse Opposite:

p-value:1e-17
log p-value:-4.098e+01
Information Content per bp:1.658
Number of Target Sequences with motif481.0
Percentage of Target Sequences with motif29.53%
Number of Background Sequences with motif277.9
Percentage of Background Sequences with motif16.78%
Average Position of motif in Targets37.2 +/- 19.2bp
Average Position of motif in Background35.9 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATTT
NNCTTTATTD

zen/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:ATTTATTT
-TTTATT-

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATTTATTT
TGTTTATTT

NCU00019/MA0929.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ATTTATTT-----
-TTTGTTTACNNN

Antp/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATTTATTT
-ATTATT-

bin/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ATTTATTT--
---TATTTAC

zen/dmmpmm(Down)/fly

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATTTATTT----
-TTTATTTTTAT

cad/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATTTATTT-
-TTTATTAN

abd-A/dmmpmm(Down)/fly

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTTATTT
ATTTAT--

AZF1/MA0277.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATTTATTT--
-TTTCTTTTT