Information for 7-TCAAGTDA (Motif 8)


Reverse Opposite:

p-value:1e-15
log p-value:-3.456e+01
Information Content per bp:1.845
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif7.98%
Number of Background Sequences with motif34.3
Percentage of Background Sequences with motif2.07%
Average Position of motif in Targets35.6 +/- 17.5bp
Average Position of motif in Background38.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TCAAGTDA
TTTCAAGTGA

vnd/MA0253.1/Jaspar

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--TCAAGTDA
TTTCAAGTG-

tin/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TCAAGTDA
TCAAGTG-

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TCAAGTDA
CTCAAGTG-

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TCAAGTDA
CTCAAGTG-

tin/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCAAGTDA
TCAAGTG-

tin/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TCAAGTDA
NCTCAAGTGG

tin/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCAAGTDA--
TCTCAAGTGGCN

tin/dmmpmm(Down)/fly

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCAAGTDA
TCTCAAGTGG

NAC92/MA1044.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCAAGTDA--
TAACACGCCACA