Information for 1-GGGATAAT (Motif 1)


Reverse Opposite:

p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.784
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets39.3 +/- 18.7bp
Average Position of motif in Background34.0 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

prd/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGATAAT
GTGATAAT

prd/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGGATAAT-
GTGATAATN

TFAM/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGGATAAT
--GATAA-

DAL80/Literature(Harbison)/Yeast

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGGATAAT
--GATAA-

DAL80(MacIsaac)/Yeast

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGGATAAT
--GATAA-

Antp/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.76
Offset:3
Orientation:forward strand
Alignment:GGGATAAT-
---ATAATT

ttk/MA0460.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGATAAT
AAGGATAAT

Antp/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGGATAAT
--AATAAT

ap/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.75
Offset:4
Orientation:forward strand
Alignment:GGGATAAT--
----TAATNN

Antp/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GGGATAAT-
---ATAATT