Information for 8-TGTGTATATA (Motif 14)


Reverse Opposite:

p-value:1e-5
log p-value:-1.192e+01
Information Content per bp:1.716
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif33.2
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets39.0 +/- 18.1bp
Average Position of motif in Background31.9 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: TA-repeat

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGTGTATATA
TATATATATA

TBP(- other)/several species/AthaMap

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGTGTATATA--
GGTATTTATAGN

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TGTGTATATA
-GTATATATA

Cf2/MA0015.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGTGTATATA-
-GTATATATAC

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGTGTATATA--
TGTATATATATACC

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTATATA----
ANNNGGATATATCCNNN

TATA-box/SacCer-Promoters/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGTGTATATA
BBHWTATATA

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTATATA--
NNNNTTTGTTTACNNT

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTGTATATA
TGTTTATTT-

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTATATA
CBTGTTTAYAWW