Information for 4-TAAWATATATWT (Motif 15)


Reverse Opposite:

p-value:1e-4
log p-value:-1.013e+01
Information Content per bp:1.670
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.4 +/- 18.5bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: TA-repeat

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TAAWATATATWT-
---TATATATATA

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TAAWATATATWT---
NANTTATATATAANGN

SPT15/MA0386.1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TAAWATATATWT------
NNNNAATATATATANCTANNN

NHP6B/MA0346.1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TAAWATATATWT-----
NNNTATTATATATANNNANA

bab1/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TAAWATATATWT-
-TAAATATAATTG

Cf2/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TAAWATATATWT-
----GTATATATA

NHP6A/MA0345.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TAAWATATATWT-------
NNATNNTTATATATAGNNNAN

Cf2/MA0015.1/Jaspar

Match Rank:8
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TAAWATATATWT--
----GTATATATAC

CCA1/MA0972.1/Jaspar

Match Rank:9
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TAAWATATATWT
----AGATATTT

MOT2/MA0379.1/Jaspar

Match Rank:10
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TAAWATATATWT
-----TATAT--