Information for 2-ATCATAAA (Motif 3)


Reverse Opposite:

p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.779
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif9.99%
Number of Background Sequences with motif72.4
Percentage of Background Sequences with motif4.69%
Average Position of motif in Targets34.8 +/- 18.1bp
Average Position of motif in Background38.5 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Abd-B/MA0165.1/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ATCATAAA
-TCATAAA

Abd-B/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:ATCATAAA-
-TCATAAAA

Dbx/MA0174.1/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:ATCATAAA
-TAATAAA

cad/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:ATCATAAA
--CATAAA

cad/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ATCATAAA-
ATCATAAAA

abd-B/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:ATCATAAA--
-TCATAAAAC

Abd-B/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:ATCATAAA--
NTCATAAAAC

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:ATCATAAA--
GTCGTAAAAT

caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer

Match Rank:9
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ATCATAAA-
GGYCATAAAW

cad/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-ATCATAAA
AANCATAAA