Information for 3-TCCCCATCTT (Motif 6)


Reverse Opposite:

p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.651
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif5.48%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets40.2 +/- 19.1bp
Average Position of motif in Background40.5 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCCCCATCTT
TCCCCA----

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCATCTT-
GCCGCCATCTTG

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCATCTT-
GCNGCCATCTTG

ADR1/MA0268.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCCCATCTT
ACCCCAC---

NHP10/MA0344.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCCCATCTT
TCCCCGGC--

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCATCTT
TTCCCCCTAC-

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCCCATCTT---
CTATCCCCGCCCTATT

Rel/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TCCCCATCTT
NGGGATTCCCC-----

skn-1/MA0547.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TCCCCATCTT
AATTGTCATCATTTT

MSN2/MA0341.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCCCCATCTT
-CCCCT----