Information for 3-TCTGATGC (Motif 8)


Reverse Opposite:

p-value:1e-6
log p-value:-1.459e+01
Information Content per bp:1.735
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets33.5 +/- 20.3bp
Average Position of motif in Background35.3 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tal1

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCTGATGC
-CAGATG-

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TCTGATGC--
NTTCTGTTGCNN

RAV1/MA0582.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TCTGATGC--
NTTCTGTTGCNN

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCTGATGC---
-MTGATGCAAT

INO2(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATGC
TTCACATGC

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCTGATGC---
-ATGATGCAAT

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTGATGC----
--TGATGCAATC

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATGC
GGCGGTTG-

INO2/MA0321.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATGC
TTCACATGC

INO4(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATGC
TTCACATGC