Information for 1-AATCCCAGCH (Motif 1)


Reverse Opposite:

p-value:1e-23
log p-value:-5.524e+01
Information Content per bp:1.631
Number of Target Sequences with motif147.0
Percentage of Target Sequences with motif18.65%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets38.1 +/- 19.6bp
Average Position of motif in Background36.1 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ACE2/MA0267.1/Jaspar

Match Rank:1
Score:0.88
Offset:3
Orientation:forward strand
Alignment:AATCCCAGCH
---ACCAGCA

SWI5/MA0402.1/Jaspar

Match Rank:2
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:AATCCCAGCH
--AACCAGCA

SWI5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.85
Offset:4
Orientation:reverse strand
Alignment:AATCCCAGCH
----CCAGCA

SWI5(MacIsaac)/Yeast

Match Rank:4
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AATCCCAGCH
--AACCAGCA

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:5
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:AATCCCAGCH
---ACCAGCA

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.72
Offset:5
Orientation:forward strand
Alignment:AATCCCAGCH
-----CAGCC

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:AATCCCAGCH----
----CCAGCTGTTN

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AATCCCAGCH----
----HCAGCTGDTN

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AATCCCAGCH-
-TGCCCAGNHW

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AATCCCAGCH
---CACAGN-