Information for 9-ACAAAGTA (Motif 12)


Reverse Opposite:

p-value:1e-7
log p-value:-1.760e+01
Information Content per bp:1.477
Number of Target Sequences with motif222.0
Percentage of Target Sequences with motif28.17%
Number of Background Sequences with motif115.7
Percentage of Background Sequences with motif16.37%
Average Position of motif in Targets36.5 +/- 19.6bp
Average Position of motif in Background36.3 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------ACAAAGTA--
AAACAGACAAAGGAAT

DOF2.5/MA0977.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ACAAAGTA
AAAAAGTG

CDF2/MA0973.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACAAAGTA-
AAAAAAGTGA

dsx/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ACAAAGTA----
NTAANACAATGTANCNN

Dof3/MA0021.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACAAAGTA
--AAAGCG

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACAAAGTA
ACAAAG--

DOF2.4/MA0982.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACAAAGTA
AAAAAGT-

PBF/MA0064.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ACAAAGTA
--AAAGC-

CDF3/MA0974.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACAAAGTA-
AAAAAGTGC

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACAAAGTA-
CAAAAAGTAA