Information for 10-GCAGTGGC (Motif 13)


Reverse Opposite:

p-value:1e-6
log p-value:-1.486e+01
Information Content per bp:1.792
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif12.44%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif5.14%
Average Position of motif in Targets37.0 +/- 18.4bp
Average Position of motif in Background39.5 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGGC---
NNNANTGCAGTGCNNTT

MET31/MA0333.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAGTGGC-
AGTGTGGCG

MET28/MA0332.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCAGTGGC
-CTGTGG-

MET28(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCAGTGGC
-CTGTGG-

MET32/MA0334.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCAGTGGC-
--TGTGGCG

RPN4/MA0373.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCAGTGGC-
--GGTGGCG

Run/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAGTGGC
GGCGGTG--

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGGC--
NNNNTGCCAGTGATTG

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCAGTGGC-
---GTGGAT

MET32(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAGTGGC
AAACTGTGGC