Information for 3-GTCATCCC (Motif 3)


Reverse Opposite:

p-value:1e-15
log p-value:-3.596e+01
Information Content per bp:1.793
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif18.53%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif5.14%
Average Position of motif in Targets37.4 +/- 19.5bp
Average Position of motif in Background31.4 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptx1/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GTCATCCC
NGTTAATCCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GTCATCCC
CNGTCCTCCC

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCCC
ACGTCATC--

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCATCCC
GTCATN--

bcd/MA0212.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTCATCCC
-TAATCC-

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GTCATCCC
TTAATCCC

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTCATCCC
CTTAATCCC

bcd-2/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTCATCCC
TTAATCC-

bcd/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GTCATCCC
GGTTAATCCN

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTCATCCC-----
NTTGTTAATCCCTCTNN