Information for 4-GGTTCAAGYGAT (Motif 4)


Reverse Opposite:

p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.775
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.38%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets36.3 +/- 16.5bp
Average Position of motif in Background37.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCAAGYGAT
NNGTTCAAGN---

tin/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGTTCAAGYGAT
---TCAAGTG--

ct/MA0218.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGTTCAAGYGAT
-GTTCAA-----

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGTTCAAGYGAT
--CTCAAGTG--

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTTCAAGYGAT
-TTTCAAGTGA-

vnd/MA0253.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTTCAAGYGAT
-TTTCAAGTG--

tin/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTTCAAGYGAT
---TCAAGTG--

vnd/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTCAAGYGAT
-GCTCAAGTGC-

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGTTCAAGYGAT
--CTCAAGTG--

ceh-22/MA0264.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTTCAAGYGAT
-TTTCAAGTGGN