Information for 8-CCCGCTTC (Motif 8)


Reverse Opposite:

p-value:1e-9
log p-value:-2.207e+01
Information Content per bp:1.608
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif10.15%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets44.4 +/- 21.3bp
Average Position of motif in Background42.5 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.82
Offset:3
Orientation:forward strand
Alignment:CCCGCTTC-
---GCTTCC

GCR2(MacIsaac)/Yeast

Match Rank:2
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CCCGCTTC--
---GCTTCCN

GCR2/MA0305.1/Jaspar

Match Rank:3
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CCCGCTTC--
---GCTTCCT

che-1/MA0260.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCCGCTTC
--GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCCGCTTC
--GGTTTC

MSN4(MacIsaac)/Yeast

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCCGCTTC
CCCCCTT-

IXR1(MacIsaac)/Yeast

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCTTC------
CCCCGCTTCCGGCTT

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCCGCTTC----
-CCACTTCCGGC

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCGCTTC---
NCCACTTCCGG

IXR1/MA0323.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCTTC------
CCCCGCTTCCGGCTT