Information for 8-AAATAAATAA (Motif 9)


Reverse Opposite:

p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.608
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif9.26%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif2.38%
Average Position of motif in Targets35.7 +/- 18.4bp
Average Position of motif in Background43.4 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AAATAAATAA--
AAACAAACATTC

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAATAAATAA
TATGTAAATAT

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAATAAATAA-
TAAGTAAACAAA

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAATAAATAA
AAATAAACA-

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAATAAATAA
HAATAAAGNN

AHL20/MA0933.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAATAAATAA
AATTAAAT--

zen/dmmpmm(Down)/fly

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAATAAATAA-
ATAAAAATAAA

zen/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAATAAATAA
-AATAAA---

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAATAAATAA
TATGTAAATAT

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAATAAATAA----
AAAAAGTAAACAAAGAC