Information for 11-ATTTCTAGTA (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.806
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif4.60%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets35.4 +/- 18.7bp
Average Position of motif in Background37.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATTTCTAGTA-
-TTTCAAGTGA

vnd/MA0253.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ATTTCTAGTA
-TTTCAAGTG

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTTCTAGTA
TTATTTTTAG--

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCTAGTA---
NNNTTTNTAATACNG

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCTAGTA
TCTATTTATAGN-

gl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTTCTAGTA--
ATTTCAAGGATA

RLM1(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATTTCTAGTA
TATTTATAGA-

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCTAGTA
GCTATTTATAGC-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCTAGTA
KCTATTTTTRGH-

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCTAGTA-----
NANTTTCAAGTGGTTAN