Information for 15-CACTGCGCCC (Motif 13)


Reverse Opposite:

p-value:1e-8
log p-value:-1.884e+01
Information Content per bp:1.703
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets31.5 +/- 15.4bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CACTGCGCCC
-ANTGCACCC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CACTGCGCCC--
AATCGCACTGCATTCCG

abi4/MA0123.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CACTGCGCCC
CGGTGCCCCC

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACTGCGCCC
CACCGCCCCC

Med/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACTGCGCCC-
-ACTGCGCCTG

RCS1(MacIsaac)/Yeast

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CACTGCGCCC
---TGCACCC

eyg/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CACTGCGCCC--
GAGTANTCACTGAGTNNGN

SUT1?/SacCer-Promoters/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACTGCGCCC
CCCCGCGC--

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACTGCGCCC
AGGTCANTGACCTN

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCGCCC
CGCGCTGAGCN-