Information for 12-TCTCACTC (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.697e+01
Information Content per bp:1.924
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets34.7 +/- 21.4bp
Average Position of motif in Background34.0 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TCTCACTC-
CTCTCTCTCY

z/dmmpmm(Down)/fly

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TCTCACTC-
---CACTCA

z/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TCTCACTC--
ANTCACTCAA

z/MA0255.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TCTCACTC--
ANTCACTCAA

Su(H)/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TCTCACTC
CTCCCAC--

z/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCTCACTC-
---CACTCA

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TCTCACTC----
NNAGTCCCACTCNNNN

SeqBias: GA-repeat

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCTCACTC--
TCTCTCTCTC

z/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TCTCACTC--
---CACTCAA

Trl/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCTCACTC
TTGCTCTCTC