Information for 19-TATTGCAGCA (Motif 19)


Reverse Opposite:

p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.669
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets38.5 +/- 18.0bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TATTGCAGCA-
-ATTGCATCAK

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TATTGCAGCA--
--TTGCAACATN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TATTGCAGCA-
-ATTGCATCAT

AARE(HLH)/mES-cMyc-ChIP-Seq/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TATTGCAGCA
GATTGCATCA

ATF4/MA0833.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TATTGCAGCA---
TATTGCATCATCC

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TATTGCAGCA--
-ATTGCACAATA

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TATTGCAGCA
GGGATTGCATNN

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TATTGCAGCA-
---TGCAGGNA

slbo/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATTGCAGCA
GATTGCNNAA

SWI5/Literature(Harbison)/Yeast

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TATTGCAGCA
----CCAGCA