Information for 22-TACATGCATA (Motif 21)


Reverse Opposite:

p-value:1e-4
log p-value:-1.045e+01
Information Content per bp:1.538
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets39.3 +/- 22.1bp
Average Position of motif in Background36.2 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

unc-86/MA0926.1/Jaspar

Match Rank:1
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:TACATGCATA-
---ATGCATAT

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TACATGCATA
TCCATGCAAA

LEC2/MA0581.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TACATGCATA-
TGCATGCACAT

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGCATA--
ANTNTTACATGTATNTA

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TACATGCATA
TGCATGCA--

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TACATGCATA---
---ATGMATATDC

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGCATA--
NNTATTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGCATA--
ANTATTACATGTANNNN

nub/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TACATGCATA-
-GCTTGCATAA

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TACATGCATA--
ANTTNTACATGTANTTN