Information for 13-AAGMCARRGCAA (Motif 22)


Reverse Opposite:

p-value:1e-3
log p-value:-7.644e+00
Information Content per bp:1.544
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.4 +/- 18.5bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGMCARRGCAA
GAGSCCGAGC--

kni/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGMCARRGCAA
AAACTAGAGCAC

kni/MA0451.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGMCARRGCAA
AAACTAGAGCAC

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGMCARRGCAA
-WDNCTGGGCA-

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAGMCARRGCAA-
AAACAGACAAAGGAAT

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAGMCARRGCAA
BCAGACWA-----

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGMCARRGCAA
ACATGCCCGGGCAT

NAC92/MA1044.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGMCARRGCAA-
-TAACACGCCACA

MAC1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AAGMCARRGCAA-
------GAGCAAA

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAGMCARRGCAA
TTAGAGACAGG----