Information for 5-CDGCARCC (Motif 7)


Reverse Opposite:

p-value:1e-12
log p-value:-2.932e+01
Information Content per bp:1.571
Number of Target Sequences with motif543.0
Percentage of Target Sequences with motif37.27%
Number of Background Sequences with motif361.3
Percentage of Background Sequences with motif24.79%
Average Position of motif in Targets35.8 +/- 20.5bp
Average Position of motif in Background36.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF094/MA1049.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CDGCARCC-
-CGCCGCCG

ERF098/MA0999.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CDGCARCC
CCGCCGCC

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CDGCARCC
ANTGCACCC

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CDGCARCC
--GCACCC

AFT2(MacIsaac)/Yeast

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CDGCARCC
-TGCACCC

ERF096/MA0998.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CDGCARCC--
CCGCCGCCAT

ERF4/MA0992.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CDGCARCC
CCGCCGCC

CRZ1(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CDGCARCC
CAGCCAC-

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CDGCARCC
-CGCCGCC

ERF1B/MA0567.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CDGCARCC-
-CGCCGCCA