Information for 7-TCCCGAGT (Motif 9)


Reverse Opposite:

p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.891
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif7.89%
Number of Background Sequences with motif37.1
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets34.3 +/- 19.8bp
Average Position of motif in Background39.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RDS2/MA0362.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TCCCGAGT
CCCCGAN-

CEP3/MA0282.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGAGT
TTTCCGAG-

PUT3/MA0358.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGAGT
TTCCCGGG-

Ik-1

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TCCCGAGT
GGTATTCCCAANN

ARO80/MA0273.1/Jaspar

Match Rank:5
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------TCCCGAGT------
NNNNANTTNCCGAGANNTNNC

RIM101/Literature(Harbison)/Yeast

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCCGAGT
TGCCAAG-

RIM101(MacIsaac)/Yeast

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCCCGAGT
TGCCAAG-

ECM22/MA0292.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCCCGAGT
CTCCGGA--

STB4/MA0391.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCCGAGT
TTCCGAG-

YDR026C(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCCCGAGT
--CCGGGT