Information for 1-TGCCCTCCWGCC (Motif 1)


Reverse Opposite:

p-value:1e-14
log p-value:-3.272e+01
Information Content per bp:1.663
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets39.4 +/- 18.1bp
Average Position of motif in Background44.9 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ADR1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGCCCTCCWGCC
---ACCCCN---

ADR1(MacIsaac)/Yeast

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGCCCTCCWGCC
---ACCCCN---

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGCCCTCCWGCC
----CCCCCCCC

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCCCTCCWGCC-
--NCTTCCCGCCC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCCTCCWGCC
TTCCCGCCWG--

SeqBias: polyC-repeat

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCCCTCCWGCC
--CCCCCCCCCC

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCCWGCC-
CTGGCAGNCTGCCA

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCCCTCCWGCC-
---GCCCCGCCCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCCCTCCWGCC
--CNGTCCTCCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCCCTCCWGCC---
TCCCCCCCCCCCCCC