Information for 6-CAGGAAGCTA (Motif 10)


Reverse Opposite:

p-value:1e-7
log p-value:-1.806e+01
Information Content per bp:1.660
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets35.6 +/- 18.4bp
Average Position of motif in Background40.0 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CAGGAAGCTA
ACAGGAAGTG-

GCR2(MacIsaac)/Yeast

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CAGGAAGCTA
-NGGAAGC--

GCR2/MA0305.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CAGGAAGCTA
-NGGAAGC--

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCTA
AACAGGAAGT--

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CAGGAAGCTA
CAGGAAGT--

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCTA
NACAGGAAAT--

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCTA
AVCAGGAAGT--

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAAGCTA
NDCAGGAARTNN

Eip74EF/MA0026.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CAGGAAGCTA
CCGGAAG---

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CAGGAAGCTA
AACCGGAAGT--