Information for 9-TAAAGRAAWA (Motif 12)


Reverse Opposite:

p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.588
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets39.4 +/- 17.0bp
Average Position of motif in Background43.8 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RME1(MacIsaac)/Yeast

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAAAGRAAWA
TCCAAAGGAA--

DOF1.8/MA0981.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAAAGRAAWA
CAAAAAGTTA--

RME1/MA0370.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAAAGRAAWA
TCCAAAGGAA--

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TAAAGRAAWA
CAAAAAGTAA--

tll/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAAAGRAAWA
-AAAGTCAAA

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TAAAGRAAWA
AAATAAAGCAA--

PHYPADRAFT_153324/MA0989.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TAAAGRAAWA
CAAAAAGTG---

PHYPADRAFT_38837/MA1022.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TAAAGRAAWA
CAAAAAGTGA--

Dof3/MA0021.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAAAGRAAWA
-AAAGCG---

blmp-1/MA0537.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAAAGRAAWA-
AAAAGTGAAAA