Information for 15-CCTGACCTTG (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.438e+01
Information Content per bp:1.657
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets39.5 +/- 19.2bp
Average Position of motif in Background27.5 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:1
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTG--
--TGACCTTGAV

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CCTGACCTTG-
-NTGACCTTGA

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCTGACCTTG----
NNNNATGACCTTGANTN

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTTG-
-ATGACCTTGA

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTG--
--TGACCTTGAN

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CCTGACCTTG-----
GCTGACCTTGAACTN

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCTGACCTTG-
NATGACCTTGA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTTG-
-CTGACCTTTG

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTG--
--TGACCTTGAT

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTTG--
-ATGACCTTGAA