Information for 9-GGAGGCAGAGGT (Motif 19)


Reverse Opposite:

p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.893
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets29.0 +/- 18.3bp
Average Position of motif in Background26.8 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGAGGCAGAGGT
-GAGSCCGAGC-

bZIP910(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAGGCAGAGGT
GGGTGCTGACGT

CRZ1(MacIsaac)/Yeast

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAGGCAGAGGT
-GAGGCTG----

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAGAGGT--
AGGGGTCAGAGGTCA

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCAGAGGT-
AGGGGGCGGGGCTG

CHA4/MA0283.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGAGGCAGAGGT
---GGCGGAGA-

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGGCAGAGGT--
TGGGGCAAAGGTCA

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGCAGAGGT
GGCGGGGGCGGGGG-

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAGGCAGAGGT
ACAGGATGTGGT

CRZ1/MA0285.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAGGCAGAGGT
-GTGGCTNNG--