Information for 19-GGTGGTGGTG (Motif 20)


Reverse Opposite:

p-value:1e-5
log p-value:-1.365e+01
Information Content per bp:1.658
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets40.7 +/- 17.9bp
Average Position of motif in Background36.1 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Run/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGTGGTGGTG
GGCGGTG---

ZBTB7C/MA0695.1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTGGTG
NTCGGTGGTCGC-

ZBTB7B/MA0694.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTGGTG
TTCGGTGGTCGC-

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTGGTGGTG-
-GAGGTGGGGC

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGTGGTG
TCGGTGGTCGCN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGTGGTGGTG
GGGGGGGG--

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTGGTGGTG
NGGGGCGGTG

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGTGGTG--
NNANTGGTGGTCTTNNN

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTGGTG-
GGCGGGGGCGGGGG

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTGGTG
ACAGGATGTGGT-