Information for 4-CACGCCCG (Motif 21)


Reverse Opposite:

p-value:1e-5
log p-value:-1.263e+01
Information Content per bp:1.693
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif4.95%
Number of Background Sequences with motif40.9
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets33.2 +/- 18.3bp
Average Position of motif in Background35.3 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

hkb/MA0450.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CACGCCCG
TCACGCCCC

hkb/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CACGCCCG-
CNTCACGCCCCC

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CACGCCCG
AGCGCGCC--

SP3/MA0746.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CACGCCCG-
GCCACGCCCCC

KLF14/MA0740.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CACGCCCG---
GGCCACGCCCCCTT

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACGCCCG
CACGCA--

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CACGCCCG--
NNGGCCACGCCTTTN

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGCCCG-
GCCACGCCCCC

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGCCCG--
GCCACGCCCACT

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CACGCCCG----
GACCACGCCCTTATT