Information for 6-CAATGCAC (Motif 22)


Reverse Opposite:

p-value:1e-4
log p-value:-9.639e+00
Information Content per bp:1.755
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets42.7 +/- 18.3bp
Average Position of motif in Background39.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CST6(MacIsaac)/Yeast

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAATGCAC
NAAATGCA-

LEC2/MA0581.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAATGCAC--
TGCATGCACAT

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAATGCAC-
TCCAATCCACA

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAATGCAC---
SSAATCCACANN

RCS1/RCS1_H2O2Hi/35-RCS1(Harbison)/Yeast

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CAATGCAC--
-ANTGCACCC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CAATGCAC----
AATCGCACTGCATTCCG

PHD1/MA0355.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAATGCAC--
ACCTGCAGCA

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAATGCAC---
--ATGCCCACC

RCS1(MacIsaac)/Yeast

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAATGCAC--
---TGCACCC

SOK2/MA0385.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAATGCAC--
NNCCTGCAGGT