Information for 3-TATAATTTRG (Motif 5)


Reverse Opposite:

p-value:1e-9
log p-value:-2.102e+01
Information Content per bp:1.764
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.3 +/- 17.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Antp/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TATAATTTRG
-ATAATT---

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------TATAATTTRG
TTTAATTATAATTAAG

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TATAATTTRG
NANTATTATAATTNNN

abd-A/dmmpmm(Down)/fly

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TATAATTTRG
-ATAAAT---

ap/dmmpmm(Down)/fly

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TATAATTTRG
TATTATT---

Antp/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TATAATTTRG
-ATAATT---

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TATAATTTRG
-ATAATT---

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TATAATTTRG
TAAGATTATAATACGG

Oct/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TATAATTTRG
NTTTAATTAN-

ap/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TATAATTTRG
TATTATT---