Information for 2-ATSGCTTGAACC (Motif 7)


Reverse Opposite:

p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.787
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets35.7 +/- 20.2bp
Average Position of motif in Background35.9 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ATSGCTTGAACC-
---GCTTGAACAA

ct/MA0218.1/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ATSGCTTGAACC
-----TTGAAC-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ATSGCTTGAACC-
------CGAACCG

OPI1(MacIsaac)/Yeast

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ATSGCTTGAACC-
------CGAACCG

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATSGCTTGAACC------
-NNANTTGACCCCTNNNN

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATSGCTTGAACC--
TATCATTAGAACGCT

tin/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATSGCTTGAACC
--CACTTGA---

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATSGCTTGAACC---
NGNTCTAGAACCNGV

OPI1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ATSGCTTGAACC
-----TCGAACC

vnd/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATSGCTTGAACC
--CACTTGAN--