Information for 5-GCCTCACTGC (Motif 9)


Reverse Opposite:

p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.753
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets38.7 +/- 18.7bp
Average Position of motif in Background41.4 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCTCACTGC------
AATCGCACTGCATTCCG

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCCTCACTGC-
---TNCCTGCA

eyg/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCTCACTGC------
GAGTANTCACTGAGTNNGN

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCACTGC
GTCATGCHTGRCTGS

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCTCACTGC
--CTCTCTCY

Trl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCACTGC
TTGCTCTCTC-

Trl/MA0205.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTCACTGC
TTGCTCTCTC-

GAGA-repeat/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCTCACTGC--
--CTCTCTCTCY

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCTCACTGC
MYGGTCACACTG-

Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCTCACTGC
KBCTACCTGW