Information for 1-BWBCCCAGSC (Motif 1)


Reverse Opposite:

p-value:1e-32
log p-value:-7.550e+01
Information Content per bp:1.586
Number of Target Sequences with motif319.0
Percentage of Target Sequences with motif32.95%
Number of Background Sequences with motif94.8
Percentage of Background Sequences with motif10.45%
Average Position of motif in Targets36.8 +/- 19.2bp
Average Position of motif in Background40.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:BWBCCCAGSC-
-TGCCCAGNHW

ACE2/MA0267.1/Jaspar

Match Rank:2
Score:0.78
Offset:3
Orientation:forward strand
Alignment:BWBCCCAGSC
---ACCAGCA

SWI5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:BWBCCCAGSC
----CCAGCA

SWI5/MA0402.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:BWBCCCAGSC
--AACCAGCA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-BWBCCCAGSC
HTTTCCCASG-

SWI5(MacIsaac)/Yeast

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:BWBCCCAGSC
--AACCAGCA

YPR022C/MA0436.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:BWBCCCAGSC
--CCCCACG-

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-BWBCCCAGSC----
ATTTCCCAGVAKSCY

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:BWBCCCAGSC-------
--TCCCAGMCRAGCCCC

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:BWBCCCAGSC
---CACAGN-