Information for 8-TCTTGGCT (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.805
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif12.81%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif4.79%
Average Position of motif in Targets40.3 +/- 19.7bp
Average Position of motif in Background35.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TCTTGGCT-
----NGCTN

RIM101/MA0368.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCT
-CTTGGCG

pros/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCTTGGCT
-CATGNCT

pho/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TCTTGGCT--
GCCGTTATGGCTTC

CRZ1/MA0285.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTTGGCT---
--GTGGCTNNG

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCT--
-NTTGGCANN

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCTTGGCT--
--TWGTCTGV

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCTTGGCT
--TTGGCA

RIM101/Literature(Harbison)/Yeast

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCT
-CTTGGCA

RIM101(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCT
-CTTGGCA