Information for 10-GCCTGTAA (Motif 12)


Reverse Opposite:

p-value:1e-7
log p-value:-1.660e+01
Information Content per bp:1.812
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif3.26%
Average Position of motif in Targets37.9 +/- 17.8bp
Average Position of motif in Background42.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HMRA2/MA0318.1/Jaspar

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GCCTGTAA-
-CATGTAAT

MATALPHA2/MA0328.2/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GCCTGTAA-
-CGTGTAAT

ara/MA0210.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCCTGTAA
---TGTTA

STB2(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCTGTAA-
-CGGGTAAN

caup/MA0217.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCCTGTAA
---TGTTA

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTAA-----
AGGACGCTGTAAAGGGA

REB1/REB1_YPD/61-REB1(Harbison)/Yeast

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCTGTAA
-CGGGTAA

SPL4/MA1058.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCTGTAA-
NNCCGTACN

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTAA----
AAGCACCTGTCAATAT

mirr/MA0233.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCTGTAA
---TGTTT