Information for 1-KGGGAGGCTGAG (Motif 2)


Reverse Opposite:

p-value:1e-24
log p-value:-5.626e+01
Information Content per bp:1.577
Number of Target Sequences with motif260.0
Percentage of Target Sequences with motif26.86%
Number of Background Sequences with motif80.5
Percentage of Background Sequences with motif8.88%
Average Position of motif in Targets39.4 +/- 19.4bp
Average Position of motif in Background38.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KGGGAGGCTGAG--
GGGGGGGGGGGGGGA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----KGGGAGGCTGAG
NNTNAGGGGCGGNNNN-

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KGGGAGGCTGAG-
--GGGGGCGGGGC

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----KGGGAGGCTGAG
NNTNNGGGGCGGNGNGN

ADR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KGGGAGGCTGAG
-NGGAGG-----

ADR1(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KGGGAGGCTGAG
-NGGAGG-----

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----KGGGAGGCTGAG
GGCGGGGGCGGGGG--

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----KGGGAGGCTGAG
NANNTGGGGGGGGNGN

CRZ1(MacIsaac)/Yeast

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:KGGGAGGCTGAG
---GAGGCTG--

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--KGGGAGGCTGAG-
GGGNGGGGGCGGGGC